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Species belonging to selected taxon:

Amborella trichopoda, Nuphar advena



ABOUT THIS RECORD

ID: MNEST001675
species: Nuphar advena
miRNA family: MIR482
source: miRNEST

Taxonomy by NCBI:
Nuphar advena Nuphar Nymphaeaceae Nymphaeales basal Magnoliophyta Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTTTCCCATTCCTCCCATCC

miRNA*
TTGGTTGGAATGGGAAAGATT

mismatches: 5
bulges: 0

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pre-miRNA
TTATATTTGCATAGGCAAACGGCAGAGGGAAAGAGTGGCCGGAAAATTTGTGTTGGTTGGAATGGGAAAGATTTGAACATTATATGAACATTTTTATCTT
TCCCATTCCTCCCATCC
CACAGCTTTCCTGCTATTCTTTCCTCCTGCTTTTTGCCATGATTCCATT


dot-bracket secondary structure
.............((((((.(((((.(((((((((((((.(((((..(((((.(((..((((((((((((((..(((..((.....))..)))..)))))
)))))))))..)))...
))))).))))).))))))))))))).))))).))))))...........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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